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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8140273 chr22:29865140 C/G C22orf30 chr22:32072242-32146120:- 0.39 6.32 6.14E-10 Box Plot
THCA rs8140273 chr22:29865140 C/G CBY1 chr22:39052641-39069859:+ 0.47 6.34 5.4E-10 Box Plot
THCA rs8140273 chr22:29865140 C/G DRG1 chr22:31795509-31926620:+ 0.54 6.87 1.97E-11 Box Plot
THCA rs8140273 chr22:29865140 C/G EP300 chr22:41487790-41576083:+ 0.36 6.07 2.58E-9 Box Plot
THCA rs8140273 chr22:29865140 C/G PLXNB2 chr22:50713408-50746056:- 0.39 5.91 6.6E-9 Box Plot
THCA rs8140273 chr22:29865140 C/G POLR3H chr22:41921808-41940610:- 0.53 6.32 5.93E-10 Box Plot
THCA rs8140273 chr22:29865140 C/G RNF185 chr22:31556169-31603005:+ 0.5 5.93 5.87E-9 Box Plot
THCA rs8140273 chr22:29865140 C/G SMCR7L chr22:39896105-39914136:+ 0.47 6.44 2.95E-10 Box Plot
THCA rs8140273 chr22:29865140 C/G TRABD chr22:50624344-50638027:+ 0.48 6.57 1.34E-10 Box Plot
THCA rs8140395 chr22:23971961 T/C IGLL3 chr22:25713888-25716191:+ 0.64 11.35 1.32E-26 Box Plot
THCA rs8140567 chr22:24008403 A/G IGLL3 chr22:25713888-25716191:+ 0.67 9.43 1.74E-19 Box Plot
THCA rs8140569 chr22:24008409 A/C IGLL3 chr22:25713888-25716191:+ 0.67 9.47 1.24E-19 Box Plot
THCA rs8140875 chr22:19840591 C/G ACO2 chr22:41865129-41924993:+ 0.6 6.9 1.67E-11 Box Plot
THCA rs8140875 chr22:19840591 C/G ANKRD54 chr22:38226862-38245334:- 0.65 7.31 1.15E-12 Box Plot
THCA rs8140875 chr22:19840591 C/G APOBEC3F chr22:39436609-39449915:+ 0.54 5.91 6.35E-9 Box Plot